Scott Chamberlain homo sapien

Software

Selected software

R

taxize Taxonomic toolbelt
rgbif R interface to the Global Biodiversity Information Facility
spocc Interface to Species Occurrence Data Sources
rnoaa R client for many NOAA datasets
crul An HTTP client, taking inspiration from Ruby’s faraday
vcr Record HTTP calls and replay them
webmockr Stub and set expectations on HTTP requests
rplos Interace to the Public Library of Science search API
solrium R client for Apache SOLR
elastic R client for Elasticsearch
analogsea R client for Digital Ocean
rphylopic R client for Phylopic
cowsay Like the command line program cowsay, but for R
rcrossref R client for various CrossRef APIs
rbhl R client for the Biodiversity Heritage Library
rbison Wrapper to the USGS Bison API
rerddap Work with ERDDAP servers
fulltext Full Text of Scholarly Articles Across Many Data Sources
gistr Interact with GitHub gists from R
geojsonio Convert many data formats to & from GeoJSON & TopoJSON
lawn turf.js R client
wellknown Go from well known text to GeoJSON and back
hoardr Manage cached files
jqr Client for jq, the JSON processor

Python

habanero A Python client for the Crossref search API
pygbif Python interface to the Global Biodiversity Information Facility
pytaxa Taxonomic classes for Python
pyobis OBIS Python client

Ruby

serrano A Python client for the Crossref search API
textminer Client to do text-mining via Crossref metadata - built on serrano
cites Search for and get citations from the command line
veyor A Ruby gem for the Appveyor API
extcite Gets DOIS and generates citations for your papers
extcite Ruby interface to the Global Biodiversity Information Facility